ABOUT THIS RECORDspecies: Solanum tuberosum
source: microPC, original name: miR827
Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGATGACCATCAACAAAC miRNA* TTGTTGATGTTCATCTAAT mismatches: 1 bulges: 0 |
pre-miRNA
GTTTGTTGATGTTCATCTAATCATGGCATATTAATGGTTGCAAAAACTATGCCAAATGATATGATGAATAGATGACCATCAACAAAC
dot-bracket secondary structure
(((((((((((.(((((((.((((..(((((((.((((............))))..))))))))))).))))))).)))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GTTTGTTGATGTTCATCTAATCATGGCATATTAATGGTTGCAAAAACTATGCCAAATGATATGATGAATAGATGACCATCAACAAAC
dot-bracket secondary structure
(((((((((((.(((((((.((((..(((((((.((((............))))..))))))))))).))))))).)))))))))))
SIMILARITIES| miRBase csi-MIR827: 0.001 PMRD ath-miR827: 0.001 microPC miR827: 0.001 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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