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Species belonging to selected taxon:
Solanum habrochaites
,
Solanum lycopersicum
,
Solanum melongena
,
Solanum pennellii
,
Solanum torvum
,
Capsicum annuum
,
Solanum tuberosum
ABOUT THIS RECORD
ID:
MNEST054664
species:
Solanum tuberosum
source:
PMRD, original name:
stu-miR158
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCCAAATGTATACAAAGGA
miRNA*
CTCCGTCTTACTTGAGAAT
mismatches:
6
bulges:
3
View larger
pre-miRNA
C
CTCCGTCTTACTTGAGAAT
A
TCCCAAATGTATACAAAGGA
dot-bracket secondary structure
(
((..((..((((((.(...
.
.).)))..))).))..))).
SIMILARITIES
miRBase
no hits
PMRD
ppt-miR158
:
0.0004
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
download this record