miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Solanum tuberosum



ABOUT THIS RECORD

ID: MNEST045272
species: Solanum tuberosum
source: microPC, original name: miR403

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGATTCACGCACAAACTCG

miRNA*

mismatches: 3
bulges: 0
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pre-miRNA
 GTTTGTGCGTGAATCTAACAACCCTTTTCATCAGAAAAACTGTTGTTGTTTGCTAGATTCACGCACAAACTCG

dot-bracket secondary structure
((((((((((((((((((((((..(((((....)))))...))))).......)))))))))))))))))...


SIMILARITIES
miRBase vvi-MIR403d: 0.000003

PMRD stu-miR403: 5e-36

microPC miR403: 0.0002		UniProt no hits

RFAM MIR403: 0.00006

Identical with: stu-miR403 from PMRD (MNEST054669)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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