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Species belonging to selected taxon:
Solanum habrochaites
,
Solanum lycopersicum
,
Solanum melongena
,
Solanum pennellii
,
Solanum torvum
,
Solanum tuberosum
ABOUT THIS RECORD
ID:
MNEST046134
species:
Solanum tuberosum
miRNA family:
MIR156
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC
miRNA*
GCTCACTTCTCATTCTGTCA
mismatches:
1
bulges:
2
View larger
pre-miRNA
TGACAGAAGAGAGTGAGCAC
ACGCAGTCGAATTGTATAAACATTTATACAATTGTCATTTGCGTGT
GCTCACTTCTCATTCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((
((((((..(((((((((((....)))))))))..))..))))))))
)))))).)))).))))))).
SIMILARITIES
miRBase
ctr-MIR156
:
0.00000006
PMRD
stu-miR156a
:
1e-43
microPC
miR156
:
1e-43
UniProt
no hits
RFAM
mir-156: 0.000001
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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