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Species belonging to selected taxon:

Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Solanum tuberosum



ABOUT THIS RECORD

ID: MNEST007366
species: Solanum tuberosum
miRNA family: MIR168
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGAC

miRNA*
CCCGCCTTGCATCAACTGAAT

mismatches: 2
bulges: 0

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pre-miRNA
TATTTCTGTTGCGGCGGCCTCTCATTCGCTTGGTGCAGGTCGGGACCTACCTCGCCGGCAACAATGGCGGTAGCTGACGGCGACGGCAGCTTACCGGTAA
AAACTTTTTTTTTTTACATGTCTGTGGCGTAGTTTGGGTCCCGCCTTGCATCAACTGAATAGGAGACTGCGGTGAAATTTGT


dot-bracket secondary structure
........((((.((((.((((.(((((.((((((((((.((((((((((..(((((.(((((....(((((((((.((....)).)))).)))))((((
(((.......))))))).))).)))))))..))..)))))))).)))))))))).))))).)))).)))).)))).......



SIMILARITIES
miRBase tcc-MIR168: 0.0000000006

PMRD stu-miR168: 1e-51

microPC miR168: 1e-51
UniProt no hits

RFAM MIR168: 0.0000000007
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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