ABOUT THIS RECORDspecies: Solanum tuberosum
miRNA family: MIRf37
source: miRNEST
Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTCGGTTCGGTTCGGTTTTT miRNA* GTACCGAACACCGAACCGAAATA mismatches: 4 bulges: 2 |
pre-miRNA
CTTGTATCATGTGTACCGAACACCGAACCGAAATAATTCGGTTCGGTTCGGTTTTTATTATTTCG
dot-bracket secondary structure
..........(((.(((((..(((((((((((....))))))))))))))))...))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTGTATCATGTGTACCGAACACCGAACCGAAATAATTCGGTTCGGTTCGGTTTTTATTATTTCG
dot-bracket secondary structure
..........(((.(((((..(((((((((((....))))))))))))))))...))).......
SIMILARITIES| miRBase no hits PMRD ptc-miRf12439-akr: 0.0002 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
