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Species belonging to selected taxon:
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST008488
species:
Sorghum bicolor
miRNA family:
MIRf10
source:
miRNEST
Taxonomy by NCBI:
Sorghum bicolor
Sorghum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTAGGCTTAAAAGATTCGTCT
miRNA*
ACAAATTTATTAAGCATAATT
mismatches:
4
bulges:
0
View larger
pre-miRNA
TTTTTAGAACTAATAAAAAAACAAATTACATAGCTCGTTAGAAAACTGCAAG
ACAAATTTATTAAGCATAATT
AATCTGTCATTAGCATATTTGGATTAG
GCTAATCATGGAGTAA
CTAGGCTTAAAAGATTCGTCT
CGTGATTCTCAACTAAACTGTGTAATTAGTTTATTTTTTATCTACATTT
dot-bracket secondary structure
....((((..(((.(((.((((.((((((((((...(((.((.((.(((.((
((.(((((.((((((.((.((
(.(((((.((((((.............
)))))).))))).)))
.)).)))))).))))).))))
.))).)).)))))....)))))))))).)))).))).))))))).....
SIMILARITIES
miRBase
osa-MIR2124a
:
0.000000000003
PMRD
osa-miR445c
:
0.00000000001
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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