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Species belonging to selected taxon:

Anolis carolinensis



ABOUT THIS RECORD

ID: MNEST007630
species: Anolis carolinensis
miRNA family: mir-490
source: miRNEST

Taxonomy by NCBI:
Anolis carolinensis Anolis Polychrotinae Iguanidae Iguania Squamata Lepidosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCATGGATCCCCAGGTGTTTT

miRNA*
AACATCTGGGAACCCACAGGT

mismatches: 5
bulges: 0

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pre-miRNA
CTGTGCTTACTCTAGTAAAGTGGTTCTTAACCCATGGATCCCCAGGTGTTTTGACCTAGAACTCTCAGAAATCCCAGACAGTTTACCAGCTGTTATGATC
TCCAGGAGTTGAAGGCCAAAACATCTGGGAACCCACAGGTTGAGAACCACTGCTCTAGTAGAATATTC


dot-bracket secondary structure
.........((((((...((((((((((((((..(((...(((((((((((((.(((..((((((..((.(((...(((((((....)))))))..))).
))..))))))..))).)))))))))))))...)))..))))))))))))))...)))).)).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM 7SK: 2e-22
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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