miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Frankliniella occidentalis



ABOUT THIS RECORD

ID: MNEST009793
species: Frankliniella occidentalis
miRNA family: miR-1897
source: miRNEST

Taxonomy by NCBI:
Frankliniella occidentalis Frankliniella Thripinae Thripidae Thripoidea Terebrantia Thysanoptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTTGGAGGGAGAAAGTGGGA

miRNA*
CCTTTTTCTTCTTACAATATT

mismatches: 4
bulges: 0

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pre-miRNA
ACATATCTCATTCCTTTTTCTTCTTACAATATTCCTTTCGCTTTGGAGGGAGAAAGTGGGATGAACTAGT

dot-bracket secondary structure
.......(((((((.((((((((((.(((.............))).)))))))))).)))))))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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