miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Trichinella spiralis, Trichinella pseudospiralis



ABOUT THIS RECORD

ID: MNEST009505
species: Trichinella spiralis
miRNA family: miR-1358
source: miRNEST

Taxonomy by NCBI:
Trichinella spiralis Trichinella Trichinellidae Trichocephalida Enoplia Enoplea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AACTGATTTTGATTGGTATGA

miRNA*
ATATATTTCTTGGGTCGTTTTT

mismatches: 5
bulges: 1

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pre-miRNA
CAAATCAATCTTATATATTTCTTGGGTCGTTTTTGCCATTACATGTTTAGAATGATGCTGCTGCTTTGCTTTTTTCTCTTTTGGAAGAACTGATTTTGAT
TGGTATGA
TGATTGGTT


dot-bracket secondary structure
..((((((((((((((...((..((((((.((((.(((..........((((.((.((.........)).)).))))....))).)))).)))))).)).
..))))))
.))))))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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