ABOUT THIS RECORDspecies: Trichinella spiralis
miRNA family: miR-1358
source: miRNEST
Taxonomy by NCBI:
Trichinella spiralis Trichinella Trichinellidae Trichocephalida Enoplia Enoplea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACTGATTTTGATTGGTATGA miRNA* ATATATTTCCTGGGTCGGTTTT mismatches: 4 bulges: 1 |
pre-miRNA
CTTTCTTTTTCAAATCAATCTTATATATTTCCTGGGTCGGTTTTGCAATTAGATTTTAGAATGATGCTGCTGCTTTGCTTTTTTCTCTTTTGGAAAAACT
GATTTTGATTGGTATGATGATTGGTTCAAAAACATG
dot-bracket secondary structure
.....(((((..((((((((((((((...((..(((((((((((.(((..(((....(((.(((.((....)).))).)))....))).)))..))))))
))))).))...)))))).)))))))).)))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTTCTTTTTCAAATCAATCTTATATATTTCCTGGGTCGGTTTTGCAATTAGATTTTAGAATGATGCTGCTGCTTTGCTTTTTTCTCTTTTGGAAAAACT
GATTTTGATTGGTATGATGATTGGTTCAAAAACATG
dot-bracket secondary structure
.....(((((..((((((((((((((...((..(((((((((((.(((..(((....(((.(((.((....)).))).)))....))).)))..))))))
))))).))...)))))).)))))))).)))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
