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Species belonging to selected taxon:

Medicago sativa, Trifolium pratense, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST040687
species: Medicago truncatula
miRNA family: MIR169
source: miRBase, original name: mtr-MIR169j (MI0005625)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGCCAAGGATGACTTGCCGG

miRNA*
GGCAAGTTGTTCTTGACTACA

mismatches: 4
bulges: 0

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pre-miRNA
GAGTGCAGCCAAGGATGACTTGCCGGTAATATATCTAATTCCTTGGTTTCTTCCGGCAAGTTGTTCTTGACTACATT

dot-bracket secondary structure
.((((.((.((((((..(((((((((........((((....))))......)))))))))..)))))).)).))))


SIMILARITIES
miRBase vvi-MIR169k: 0.00000006

PMRD vvi-miR169k: 0.00000006

microPC miR169: 0.000003
UniProt no hits

RFAM MIR169_2: 4e-37

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Bonnet E, Unpublished (2007).,




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