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Species belonging to selected taxon:

Medicago sativa, Trifolium pratense, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008359
species: Medicago truncatula
miRNA family: MIR1514
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCATTTCTAAAATAGGCATT

miRNA*
CGCCTATTTTAGAATGAAAA

mismatches: 1
bulges: 1

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pre-miRNA
ACACTGCTCTTTTCATTTCTAAAATAGGCATTGCCATTCAAATTCCATTGATTCATTCAGCAACGCCTATTTTAGAATGAAAACAACATTT

dot-bracket secondary structure
.........((((((((.(((((((((((.((((...((((......))))........)))).)))))))))))))))))))........


SIMILARITIES
miRBase gma-MIR1514a: 0.00007

PMRD gma-miR1514a: 0.00007

microPC miR1514: 4e-34
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: miR1514 from microPC (MNEST046132)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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