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Species belonging to selected taxon:

Medicago sativa, Trifolium pratense, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008366
species: Medicago truncatula
miRNA family: MIR399
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAGCCGCCCTG

miRNA*
GGGCATGTCTCTATTGGCAAG

mismatches: 4
bulges: 0

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pre-miRNA
AAATCAATCATAGGGCATGTCTCTATTGGCAAGTGATATGGTGATATTTCATTTGACATGGCGGCTCTAGAAATTCACTTGCCAAAGGAGAGCCGCCCTG
TGAGCGTTT


dot-bracket secondary structure
.......(((((((((...(((((.(((((((((((..(((...(((.((....)).)))......))).....))))))))))).)))))...))))))
)))......



SIMILARITIES
miRBase mtr-MIR399n: 7e-33

PMRD mtr-miR399d: 3e-32

microPC no hits
UniProt no hits

RFAM mir-399: 0.00009
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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