ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIR2676
source: miRNEST
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATTGTTTGGATAATAATTTG miRNA* AGTTAAATTTAGATAATTTC mismatches: 2 bulges: 1 |
pre-miRNA
CAAATACTTTGGGGTGAATTCCATTGTTTGGATAATAATTTGAAGCATTTTCAAAATGATGGAAATTTATGTATTATTTTGTTCAAGTTAAATTTAGATA
ATTTCAAATGACACCTAAAAACT
dot-bracket secondary structure
.......(((.(((((.(((..(((((((((((..(((((((((.......((((((((((..........))))))))))))))))))).)))))))))
))....)))..))))).)))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CAAATACTTTGGGGTGAATTCCATTGTTTGGATAATAATTTGAAGCATTTTCAAAATGATGGAAATTTATGTATTATTTTGTTCAAGTTAAATTTAGATA
ATTTCAAATGACACCTAAAAACT
dot-bracket secondary structure
.......(((.(((((.(((..(((((((((((..(((((((((.......((((((((((..........))))))))))))))))))).)))))))))
))....)))..))))).)))...
SIMILARITIES| miRBase mtr-MIR2676a: 2e-46 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
