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Species belonging to selected taxon:

Medicago sativa, Trifolium pratense, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008379
species: Medicago truncatula
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCTC

miRNA*
 GGAATGAGGTTTGTTCCAAGA

mismatches: 4
bulges: 0
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pre-miRNA
 TTTGGAATGAGGTTTGTTCCAAGATCATCACACATCATGTTTCTTCTTCCCTTTCAATAATTCTTGATTAATTTATGTTCATACATCTATATATATATCT
ATATATATTATCAAGTCATTACATGCATGGGATGAGATATTGAGAGTGATCTCGGACCAGGCTTCATTCCTC

dot-bracket secondary structure
...(((((((((((((.(((.(((((((......(((((((((....((((...((.((((.((((((.(((.(((((..(((.((......)).)))..
))))).)))))))))..))))..))...)))).)))))).)))..))))))).))).)))))))))))))..


SIMILARITIES
miRBase mtr-MIR166f: 1e-51

PMRD mtr-miR166c: 4e-51

microPC miR166: 0.0000006		UniProt no hits

RFAM mir-166: 2e-50		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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