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Species belonging to selected taxon:

Medicago sativa, Trifolium pratense, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008407
species: Medicago truncatula
miRNA family: miR162
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGATGCAGCGGTTCATCGAT

miRNA*
 CGATAAACCTCTGCATCCAGC

mismatches: 2
bulges: 0
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pre-miRNA
 GAAGTTCGTCACTGGATGCAGCGGTTCATCGATCTGTTCCTGAATTTTGTTTGTCTCGTAAAACAAACATGAATCGGTCGATAAACCTCTGCATCCAGCG
CTCACTTT

dot-bracket secondary structure
(((((..((..((((((((((.((((.(((((((.((((.((...(((((((........))))))))).)))).))))))).)))).)))))))))).)
)..)))))


SIMILARITIES
miRBase mtr-MIR162: 1e-56

PMRD mtr-miR162d: 3e-44

microPC miR162: 3e-44		UniProt no hits

RFAM MIR162_2: 1e-44		most similar mature miRNAs

Identical with: miR162 from microPC (MNEST046557)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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