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Species belonging to selected taxon:
Medicago sativa
,
Trifolium pratense
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST008418
species:
Medicago truncatula
miRNA family:
MIR2586
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGAGGAGTGTTCGTGCTTCAT
miRNA*
GAAGCACGGATACGGACATGGA
mismatches:
4
bulges:
1
View larger
pre-miRNA
ATAACAATCTAT
GAAGCACGGATACGGACATGGA
CACGGACACCAACACGGCTAATAATTTGAAAAAATCACATAATTCAGTGTAATTACAAGTGTCGGT
GTTGGACACGACACATGTCCGACACCGGGACACGACACATGTCCGACACTGGGACACGCCTAATC
CGAGGAGTGTTCGTGCTTCAT
AGATAATAA
dot-bracket secondary structure
......((((((
(((((((((((((.....((((
..((((((((.....))..(((.((.(((.....))).)).)))..((((........((((((((
((((((((.......)))))))))))..))))).)))).))))))....((((.....)))).))
))....)))))))))))))))
)))).....
SIMILARITIES
miRBase
mtr-MIR2586
:
8e-25
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record