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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST001055
species: Hordeum vulgare
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTATTTTGGGACGGAGGGAGT

miRNA*
TCCCTCCGTTCCAAAATAACT

mismatches: 0
bulges: 0

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pre-miRNA
CACTAAATTATACTCCCTCCGTTCCAAAATAACTGTCTCAACTTTATACTATATCTAGTATAAATTTATACTAAGCTTAGGACAGTTATTTTGGGACGGA
GGGAGT
ACTAGAAAAT


dot-bracket secondary structure
..........((((((((((((((((((((((((((((.((.(((((((((....)))))))))((((...)))).)).)))))))))))))))))))))
))))))
).........



SIMILARITIES
miRBase far-MIR1122: 0.000006

PMRD hpr-miR1120: 0.0000000004

microPC miR1439: 2e-27
UniProt no hits

RFAM MIR1122: 3e-42
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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