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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000938
species: Hordeum vulgare
miRNA family: MIR1135
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGCGACAAGTAATTCCGGAC

miRNA*
CTGGAATTACTTGTTGGAGAA

mismatches: 1
bulges: 0

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pre-miRNA
GGATAAAATGTACTACCTCGGTCTGGAATTACTTGTTGGAGAAATAGATGTATCCAAGATGTATTTTAAGTTCCAAGATTCATCCATTTTTAACCATTTC
TGCGACAAGTAATTCCGGAC
NGAAGGGTGTATCCAAGTT


dot-bracket secondary structure
(((((.....((((...((.((((((((((((((((((.((((((............((((.(((((.......))))).))))...........)))))
).))))))))))))))))))
.))..))))))))).....



SIMILARITIES
miRBase tae-MIR1135: 0.00003

PMRD ata-miR1122: 0.0000000005

microPC miR1135: 0.00003
UniProt no hits

RFAM MIR1122: 0.000000000009
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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