miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000955
species: Hordeum vulgare
miRNA family: MIRf719
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GATTTGTCCACGTCATCACAA

miRNA*
TGATGATGTGGACAAATTCC

mismatches: 2
bulges: 0

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pre-miRNA
ATATATATTAGAAATTTAGAAACTACTGTTAGATAAAAAAAGGACGTTCGAGATTTGTCCACGTCATCACAAGTAAAAAGTTTACTCATGGATTTATTGA
TGAGTCACGGTGAAATTTTTACTATGATGATGTGGACAAATTCCGAACATCCATTTTCGATCCAATAGATGTTTCAAGTTTGTACCATATAT


dot-bracket secondary structure
((((((..((.((((((.(((((..(((((.(((..((((.(((.(((((.((((((((((((((((((..((((((((.((((((....((((((....
))))))..)))))).)))))))).)))))))))))))))))).))))).))).))))..))).)))))..))))))))))).))..))))))



SIMILARITIES
miRBase osa-MIR2862: 0.0000002

PMRD osa-miRf11197-akr: 0.0000000000002

microPC no hits
UniProt no hits

RFAM MIR811: 0.00000000000005
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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