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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000997
species: Hordeum vulgare
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGGACAGAGGGAATATT

miRNA*
 TACTCCCTCCGTTTCAAAATA

mismatches: 3
bulges: 0
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pre-miRNA
 AATCATATATGCTACTCCCTCCGTTTCAAAATAAGTGTCTTAAGCTTAGTACAATTTTATACTAGAACTAGTACAAAGTTGAAACAGATATTTTGGGACA
GAGGGAATATTATCAACTAA

dot-bracket secondary structure
........(((.((.((((((.(((((((((((..(((.((((.(((.((((..(((((...)))))...)))).))))))).)))..))))))))))).
)))))).)).))).......


SIMILARITIES
miRBase osa-MIR812a: 0.0004

PMRD osa-miR812a: 0.0004

microPC miR1439: 1e-31		UniProt no hits

RFAM MIR1122: 6e-28		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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