ABOUT THIS RECORDspecies: Triticum turgidum subsp. durum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTCCCTCCGTCCCATAATG miRNA* TTATGGGACGGAGGGAGTATA mismatches: 0 bulges: 0 |
pre-miRNA
GTCCAATGATAAAATGTACTCCCTCCGTCCCATAATGTAGTGTCAAAAAACGTCTTACATTATGGGACGGAGGGAGTATATTTCAAAAATTGT
dot-bracket secondary structure
...((((....((((((((((((((((((((((((((((((((......)))..))))))))))))))))))))))))))))).....)))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTCCAATGATAAAATGTACTCCCTCCGTCCCATAATGTAGTGTCAAAAAACGTCTTACATTATGGGACGGAGGGAGTATATTTCAAAAATTGT
dot-bracket secondary structure
...((((....((((((((((((((((((((((((((((((((......)))..))))))))))))))))))))))))))))).....)))).
SIMILARITIES| miRBase hvu-MIR1436: 0.0000000003 PMRD tae-miR1130: 0.00000002 microPC miR1436: 0.00000000000008 | UniProt no hits RFAM MIR1122: 4e-16 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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