ABOUT THIS RECORDspecies: Triticum monococcum
miRNA family: MIR1122
source: miRNEST
Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTCCCTCGGTCCCAAAATA miRNA* TTTTGGGACGGAGGGAGTACT mismatches: 1 bulges: 0 |
pre-miRNA
TGTGGTAGCATTCCTCCTAGCTTCATAGTATGGTCTATCTAGCTTGGCTTTTACTCCCTCGGTCCCAAAATAAGTGACACTTATTTTGGGACGGAGGGAG
TACTTTAATGAATCTGAAGAAGCGTTATGTTT
dot-bracket secondary structure
(((....))).....((.((((..((((......))))..)))).))....(((((((((.((((((((((((((...)))))))))))))).)))))))
))...(((((..((....))..))))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGTGGTAGCATTCCTCCTAGCTTCATAGTATGGTCTATCTAGCTTGGCTTTTACTCCCTCGGTCCCAAAATAAGTGACACTTATTTTGGGACGGAGGGAG
TACTTTAATGAATCTGAAGAAGCGTTATGTTT
dot-bracket secondary structure
(((....))).....((.((((..((((......))))..)))).))....(((((((((.((((((((((((((...)))))))))))))).)))))))
))...(((((..((....))..))))).....
SIMILARITIES| miRBase osa-MIR1862c: 0.000006 PMRD osa-miRf10381-akr: 0.0000004 microPC miR1439: 0.0000000004 | UniProt no hits RFAM MIR1122: 0.0000001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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