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Species belonging to selected taxon:
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST002778
species:
Triticum monococcum
miRNA family:
MIR1436
source:
miRNEST
Taxonomy by NCBI:
Triticum monococcum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATATTATGGGACGGAGGGA
miRNA*
CCATCCGTCCCATAATATAA
mismatches:
3
bulges:
1
View larger
pre-miRNA
GCC
CCATCCGTCCCATAATATAA
AAGTGTTTTTCACACTACACTAGTGACAAAAACGCTCTT
ATATTATGGGACGGAGGGA
dot-bracket secondary structure
..(
((.(((((((((((((((((
.(((((((((..(((((...)))))..))))))))).))
)))))))))))))))))).
SIMILARITIES
miRBase
hvu-MIR1120
:
0.000000000001
PMRD
tae-miR1120
:
0.000000000004
microPC
miR1439
:
0.0000000000003
UniProt
no hits
RFAM
MIR1122: 5e-24
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record