miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST002808
species: Triticum turgidum subsp. durum
miRNA family: MIR2033
source: miRNEST

Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATTTCTTTACAGATGGAGCA

miRNA*
 CTCCCTCCGTAAAGAAATATA

mismatches: 4
bulges: 0
View larger
pre-miRNA
 AAAAAAGCACTCCCTCCGTAAAGAAATATAATAAAATAATGATCTAAACGTTTTTATATTTCTTTACAGATGGAGCAGATGAG

dot-bracket secondary structure
.........((((.((.((((((((((((((.((................)).)))))))))))))).)).))))........


SIMILARITIES
miRBase tae-MIR1121: 0.000004

PMRD ave-miR1120: 0.0000002

microPC no hits		UniProt no hits

RFAM MIR1122: 0.000004		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;