miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Meloidogyne hapla, Heterodera glycines, Meloidogyne incognita, Meloidogyne chitwoodi, Globodera rostochiensis



ABOUT THIS RECORD

ID: MNEST009811
species: Meloidogyne chitwoodi
miRNA family: mir-1305
source: miRNEST

Taxonomy by NCBI:
Meloidogyne chitwoodi Meloidogyne Meloidogyninae Meloidogynidae Tylenchoidea Tylenchina Tylenchida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTAAACTCTAATGGGCGTC

miRNA*
GACTCATTGGACCTTTAAAAAG

mismatches: 5
bulges: 1

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pre-miRNA
GACTCATTGGACCTTTAAAAAGGAAAATAAACCAATTCTTTTTTAAACTCTAATGGGCGTCCGCAACTTT

dot-bracket secondary structure
..(((((((((..((((((((((((..........)))))))))))).))))))))).............


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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