miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Patiria pectinifera



ABOUT THIS RECORD

ID: MNEST009088
species: Patiria pectinifera
miRNA family: miR-2390
source: miRNEST

Taxonomy by NCBI:
Patiria pectinifera Patiria Asterinidae Valvatida Valvatacea Asteroidea Asterozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGTGTGTTTTTGTTTTCC

miRNA*
ATACAAGAAAAACACCGCTG

mismatches: 4
bulges: 2

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pre-miRNA
CAAGATTTACATCTTTCCACCAGATACAAGAAAAACACCGCTGAAAAAATGCAGCCGACACACACAATAGGACATGAATTTACATAAACTGCACCATTCA
GTTGTGTGTTTTTGTTTTCC
CGTTTAACTTTTCTTGTTTG


dot-bracket secondary structure
.(((((....))))).......((.(((((((..((((.((((((....(((((..................................)))))...))))
)).)))).)))))))..)).
....................



SIMILARITIES
miRBase bta-mir-2390: 0.0001

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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