miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Vitis shuttleworthii, Vitis vinifera



ABOUT THIS RECORD

ID: MNEST008294
species: Vitis vinifera
miRNA family: MIR529
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCTCACCGCTCTCTTCTTCA

miRNA*
AAGAAGACGCGGGGTGGTG

mismatches: 4
bulges: 2

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pre-miRNA
TTTTCCGTTGCAGGTATGAGTGCGACTGCTGCTCTCACCGCTCTCTTCTTCAATGGTTTCCAATCTCCTCCCCACACTAAGCCCTCTCTCTACTTTAAGA
AGACGCGGGGTGGTG
CAGTTTCCACGGCCTGCCATG


dot-bracket secondary structure
.....(((.((((((....(((.((((((.(((.((.((((..(((((((....(((..................................)))..))))
))).)))))).))))
)))))..))).)))))).)))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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