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Species belonging to selected taxon:

Vitis shuttleworthii, Vitis vinifera



ABOUT THIS RECORD

ID: MNEST008297
species: Vitis vinifera
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTCTTCCTCTTCCTCTTCTT

miRNA*
GAAGAGGAGGGGGAGGAGCAA

mismatches: 1
bulges: 0

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pre-miRNA
CGACCCTGTTTCCTCTTCCTCTTCCTCTTCTTCCAGTGAGGAAGAAGAGGAGGGGGAGGAGCAAAGATCAGA

dot-bracket secondary structure
.....((((((.((((((((((((((((((((((.....)))))))))))))))))))))).)))...))).


SIMILARITIES
miRBase mtr-MIR2673b: 0.00005

PMRD no hits

microPC no hits
UniProt no hits

RFAM 7SK: 0.0009
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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