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Species belonging to selected taxon:

Vitis shuttleworthii, Vitis vinifera



ABOUT THIS RECORD

ID: MNEST008298
species: Vitis vinifera
miRNA family: MIR827
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTAGATGATCATCAACAAACA

miRNA*
TTTTGTTGCTGGTCATCTAGTC

mismatches: 1
bulges: 1

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pre-miRNA
GCTATGAATATGTTTTGTTGCTGGTCATCTAGTCATTGTTAGTCATGTTTAAAGCTCATGGCAGGATGATTAGATGATCATCAACAAACACATTCAGGA

dot-bracket secondary structure
....(((((.(((((.((((.((((((((((((((((....((((((.........))))))..)))))))))))))))).))))))))).)))))...


SIMILARITIES
miRBase osa-MIR827b: 0.00002

PMRD osa-miR827b: 0.00002

microPC miR827: 0.0003
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence





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