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Species belonging to selected taxon:
Vitis shuttleworthii
,
Vitis vinifera
ABOUT THIS RECORD
ID:
MNEST008303
species:
Vitis vinifera
miRNA family:
MIRf1281
source:
miRNEST
Taxonomy by NCBI:
Vitis vinifera
Vitis
Vitaceae
Vitales
rosids incertae sedis
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTGTTTGGTTGCTGAGAAAA
miRNA*
GGTTTTCTGAAACTGGAGAAGAAA
mismatches:
5
bulges:
1
View larger
pre-miRNA
GTTTTGATGTG
TCTGTTTGGTTGCTGAGAAAA
GGTGGGAAAAGGAAAGTGGTTACGATTTTGTGCTTTTGTTATCTG
GGTTTTCTGAAACTGGAGAAGAA
A
ACTTA
dot-bracket secondary structure
........((.
(((.(((((((...(((((.(
(((((.(((((((((.((....)).))))...))))).)))))).
..)))))...)))))))..))).
.
))...
SIMILARITIES
miRBase
vvi-MIR3629c
:
0.0003
PMRD
ptc-miRf12247-akr
:
0.0003
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record