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Species belonging to selected taxon:

Vitis shuttleworthii, Vitis vinifera



ABOUT THIS RECORD

ID: MNEST008309
species: Vitis vinifera
miRNA family: miR3634
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTCCGACTCGCACTCATGCCGT

miRNA*
GGCATATGTGTGGATGAAAGA

mismatches: 4
bulges: 2

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pre-miRNA
TGGTAAAGGGTGGAGTTTTGTGAAGCTTATGGCATATGTGTGGATGAAAGAAAGGTGTTTAAATCATGTCTTTCCGACTCGCACTCATGCCGTTGGTTTC
AGATCACTCCTCCCTCTCCC


dot-bracket secondary structure
.((...((((.(((((....(((((((.(((((((..((((((..((((((..(((......)))...))))))....))))))..))))))).))))))
)....))))).))))..)).



SIMILARITIES
miRBase vvi-MIR3634: 4e-50

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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