miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Vitis shuttleworthii, Vitis vinifera



ABOUT THIS RECORD

ID: MNEST008299
species: Vitis vinifera
miRNA family: MIR827
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTAGATGACCAGCAACAAAAC

miRNA*
TTGTTGATGATCATCTAATC

mismatches: 3
bulges: 1

View larger
pre-miRNA
AGCCGTGATGTGATGCATTATCCTGAATGTGTTTGTTGATGATCATCTAATCATCCTGCCATGAGCGTTAAACATGACTAACAATGACTAGATGACCAGC
AACAAAAC
ATATTCATAGCTGCAAAACACATACTAGA


dot-bracket secondary structure
.......(((((.(((((((...(((((((((((((((.((.(((((((.((((.....((((.........)))).......)))).))))))).)).)
))).))))
)))))))))).))))...)))))......



SIMILARITIES
miRBase osa-MIR827b: 0.00003

PMRD osa-miR827b: 0.00003

microPC miR827: 0.0004
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;