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Species belonging to selected taxon:

Zinnia violacea



ABOUT THIS RECORD

ID: MNEST002852
species: Zinnia violacea
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Zinnia violacea Zinnia Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCG

miRNA*
ATGGGTGTTGAGGAAGATGATT

mismatches: 5
bulges: 1

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pre-miRNA
GCGTCACAATTATCATCATCATAAACGTCTTCGTCGTCGTAGTAAGGTTGATCATCATCATCATCATCATCGGAAAGAATGGTTGATGGGTGTTGAGGAA
GATGATT
GGAATTCATGGTTGCATTGAAGAATTGTGGAGAATTGAAGATGGGTTT


dot-bracket secondary structure
.....((.(((.(((((.((((((...((((((..(.((..((.((.(((((((((.((.(((...(((((((.........)))))))....))).)).
)))))))
))..)).))...)))..)))))).)))))).))..))).)))..))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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