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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Panax ginseng, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002850
species: Zinnia violacea
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Zinnia violacea Zinnia Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACATCATCATCATCATCTTCT

miRNA*
TGATGATGATGATGATTTG

mismatches: 1
bulges: 2

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pre-miRNA
GCCTTGTCACAACATCATCATCATCATCTTCTTCTTGTTGTTCTTCCACTTCAACAACATCTTTATTTGCATCTAATTCATGTTCTTCTGCTTTGCCTTT
ATTCCCACCTTGTTTCTTGTGGTCAAGATTCAATGAACCCGGTTCACAATTGTTGACAGAAGCTGGATTCCTTGACACCCACCTGGGATTTCTTTGGATT
CGAGTGGTGGTGGTGATGATGATGATGATTTGGGATCAAC


dot-bracket secondary structure
.(((.((((...((((((((((((((((..((.((((..((((..((((...(((((......((...(((......................)))...)
)........)))))....))))..((((.((((.(((.((((((................)))))).))).))))..(((....)))...)))).)))).
)))).)).)))))))))))))))).))))..)))......



SIMILARITIES
miRBase no hits

PMRD ghr-miR414f: 0.0000002

microPC no hits
UniProt no hits

RFAM mir-598: 0.000004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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