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Species belonging to selected taxon:
Agrostis stolonifera
,
Oryza sativa
,
Avena barbata
,
Avena sativa
,
Curcuma longa
,
Cynodon dactylon
,
Elaeis guineensis
,
Eragrostis curvula
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Musa ABB Group
,
Panicum virgatum
,
Pseudoroegneria spicata
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Zingiber officinale
,
Cenchrus ciliaris
,
Brachypodium distachyon
,
Zea mays
,
Triticum aestivum
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST001588
species:
Musa ABB Group
miRNA family:
MIR397
source:
miRNEST
Taxonomy by NCBI:
Musa ABB Group
Musa x paradisiaca
Eumusa
Musa
Musaceae
Zingiberales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATTGAGTGCAGCGTTGATGA
miRNA*
ACCAACGCTGCACCCAATAA
mismatches:
2
bulges:
0
View larger
pre-miRNA
GAGGACCTGGATCGAAGGCATC
ATTGAGTGCAGCGTTGATGA
GAATCCAGTTTCCCTGATGATTAGGAACATGGGGGGTTTC
ACCAACGCTGCACCCAAT
AA
TGCCTTCGACGTCTTGGAA
dot-bracket secondary structure
.....((.(((((((((((((.
((((.(((((((((((.(((
((.(((((((..(((((...)))))))).))))...))))
).))))))))))).))))
.)
)))))))))..))).))..
SIMILARITIES
miRBase
bdi-MIR397b
:
0.000000006
PMRD
bdi-miR2508
:
0.000000006
microPC
miR397
:
0.00002
UniProt
no hits
RFAM
MIR397: 0.00000003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record