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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008466
species: Sorghum bicolor
miRNA family: MIR168
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGATCGGGAC

miRNA*
CCCGCCTTGCACCAAGTGAAT

mismatches: 3
bulges: 0

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pre-miRNA
CCGCCTCGGGCTCGCTTGGTGCAGATCGGGACCTGCCGCCGTGCTCGGACGGGACAGATCCCGCCTTGCACCAAGTGAATCCGAGCCG

dot-bracket secondary structure
.((.((((((.(((((((((((((..(((((.(((((((((....))).)))..))).)))))..))))))))))))).)))))).))


SIMILARITIES
miRBase sbi-MIR168: 7e-45

PMRD sbi-miR168: 7e-45

microPC miR168: 2e-32
UniProt no hits

RFAM MIR168: 1e-43
most similar mature miRNAs

Identical with: miR168 from microPC (MNEST044880)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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