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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Cucumis melo subsp. melo
,
Euonymus alatus
,
Euphorbia esula
,
Fagus sylvatica
,
Fragaria vesca
,
Fragaria x ananassa
,
Glycine soja
,
Glycyrrhiza uralensis
,
Hevea brasiliensis
,
Humulus lupulus
,
Jatropha curcas
,
Juglans hindsii x Juglans regia
,
Linum usitatissimum
,
Lotus japonicus
,
Manihot esculenta
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Prunus armeniaca
,
Prunus persica
,
Quercus petraea
,
Quercus robur
,
Trifolium pratense
,
Bruguiera gymnorhiza
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Populus trichocarpa
,
Phaseolus vulgaris
,
Ricinus communis
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST001405
species:
Linum usitatissimum
miRNA family:
MIR162
source:
miRNEST
Taxonomy by NCBI:
Linum usitatissimum
Linum
Linaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCA
miRNA*
GAGGCAGCGGTTCATCGATC
mismatches:
3
bulges:
0
View larger
pre-miRNA
GTTGTGAAGAGGGAGGGAACACACGGAGTTTG
GAGGCAGCGGTTCATCGATC
TCTTCATGGTTTATGTGGGTTCATCCGATCACAAAAACACGTGAATCG
A
TCGATAAACCTCTGCATCCA
GCAACCCCCCTAGTTTCTCCCTTCCTACC
dot-bracket secondary structure
...(((..((((((((((......((.(((((
((.((((.((((.(((((((
..((((((((((.(((((..((....))))))).)))).))))))..)
)
))))).)))).)))).))))
..)))))......))))))))))..))).
SIMILARITIES
miRBase
csi-MIR162
:
0.0000000005
PMRD
rco-miR162
:
0.0000000005
microPC
miR162
:
0.00000000003
UniProt
no hits
RFAM
MIR162_2: 0.000000009
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record