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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST045025
species: Solanum tuberosum
source: microPC, original name: miR394

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGCATTCTGTCCACCTCC

miRNA*
AGGTGGGCATACTGCCAA

mismatches: 3
bulges: 0

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pre-miRNA
TTGGCATTCTGTCCACCTCCCTCGGTTCTTTTTCGAAAAAAGGAGGAGGAAAGCAAGATTAATGTGGAGGTGGGCATACTGCCAA

dot-bracket secondary structure
.(((((.(.(((((((((((..((.(((((((((........)))))))))...........)).))))))))))).).))))).


SIMILARITIES
miRBase vvi-MIR394b: 0.000004

PMRD vvi-miR394b: 0.000004

microPC miR394: 0.000004
UniProt no hits

RFAM MIR394: 0.00007

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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