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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST046209
species: Solanum tuberosum
source: microPC, original name: miR168

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGA

miRNA*
CCGCCTTGCATCAACTGA

mismatches: 2
bulges: 0

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pre-miRNA
TCGCTTGGTGCAGGTCGGGACCTACCTCGCCGGCAACAATGGCGGTAGCTGACGGCGACGGCAGCTTACCGGTAAAAACTTTTTTTTTTTACATGTCTGT
GGCGTAGTTTGGGTCCCGCCTTGCATCAACTGA


dot-bracket secondary structure
(((.((((((((((.(((((((((.(((((((.(((((....(((((((((.((....)).)))).)))))(((((((.......))))))).))).)))
)))).))..))))))))).)))))))))).)))



SIMILARITIES
miRBase ptc-MIR168b: 0.0001

PMRD stu-miR168: 7e-52

microPC miR168: 7e-52
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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Liczniki na strone;