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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST007387
species: Solanum tuberosum
miRNA family: MIR1030
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTGCATTTGCACCTGCACCT

miRNA*
 GTGTTGGTGCTCATGCAGACA

mismatches: 3
bulges: 0
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pre-miRNA
 TATTTCTGTAAACAAGAGACATATTTTTATCTGCATTTGCACCTGCACCTTAGTGAACGAATTTGTTAGCATATAATTCGTGCAGAAAGGTGTTGGTGCT
CATGCAGACAAAAATGGTATCTTGGCCTTCCATTGG

dot-bracket secondary structure
............(((((.((.(((((((.(((((((..(((((.(((((((..((.(((((((...((...)).))))))).))..))))))).))))).
.))))))).))))))))).)))))............


SIMILARITIES
miRBase ptc-MIR530a: 0.00000003

PMRD ptc-miRf11026-akr: 0.00000003

microPC miR1030: 0.00003		UniProt no hits

RFAM MIR530: 0.0000005		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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Liczniki na strone;