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Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Eucalyptus globulus, Eucalyptus gunnii, Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Limnanthes alba, Paullinia cupana var. sorbilis, Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis, Thellungiella halophila, Theobroma cacao, Tropaeolum majus, Carica papaya, Citrus clementina, Arabidopsis thaliana, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST000570
species: Eucalyptus globulus
miRNA family: MIRf661
source: miRNEST

Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGCCAAAGGAGAGTTGCCCT

miRNA*
GGCTTCTCTACTTTGGCAACA

mismatches: 3
bulges: 0

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pre-miRNA
ACACTGAGCAAACCAGTTTTAGGGCTTCTCTACTTTGGCAACACATGTCAATGATGACGACGACGGAGAAGTCGAACGGATGCCGTCCAGTCATCGACGA
CTTGCCAAAGGAGAGTTGCCCTTTGACTGCTTCTGCTTAAC


dot-bracket secondary structure
....((((((((.(((((..(((((..((((.(((((((((.....(((..(((((((...(((((....(((.....))).)))))..)))))))..))
)))))))))).))))..)))))..))))).)).))))))..



SIMILARITIES
miRBase vvi-MIR399b: 0.0000000001

PMRD vvi-miR399b: 0.0000000001

microPC miR399: 5e-53
UniProt no hits

RFAM mir-399: 0.000002
most similar mature miRNAs

Identical with: miR399 from microPC (MNEST046063)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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