mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCATCATCATCATCATCTGGA CGCCGATGACTATGATTATGACT GGCGTGGCATACGGTGCATCACCATCATCATCATCATCTGGATCTTCCTCCGCCGATGACTATGATTATGACTATTCACACGGTATCGCTC TTCGATGTAACAACTAATTTAACTGTAAATAGCATGATTTCAAACTGAACCCTTCTTCCTTGAAACCCTACTTTAACCCTTCCCTTCTCTGCTTTCATTTCATTGCAAAAGATTCTCCATCTGCGCGGGTCAGATACTCGTTATTCTGATTCACGTACAAAACAAAACAAACTTAGAAAATTCAAGAATGACACGTGCATTTCACGTGGTGATTGTTGCCATGGTGGTGTTCGCCATCATTGGCGTGGCATACGGTGCATCACCATCATCATCATCATCTGGATCTTCCTCCGCCGATGACTATGATTATGACTATTCACACGGTATCGCTCCTTCACCAAACGCCAAGAACCACCACGTTCCTACCCCTTCTAATGCTACTAAGAACAAGAACGACGATTCTTCACCAAGTGCTGCCTCTAGGCATGTCTCATTCTCTGCCACTGTCGCAGCTGCCACTCCGGCTCTCGTCGCCGCCGCCTTCTATTTCTGATCGTCATTCTTGGCTTCAATATTTTTTTTCTTTATTAACAATGTGTAATGTAAAGAAAGAACGTCTATTGCTCTTGTATTTTCCAGAAATGCACGCCTGTTGTTTTGTG 4 2 5' arm Arachis_duranensis mirnest 100 100 -20.9 ((((..((.....(((.((...(((.(((((..(((((((((......))))..)))))..))))).)))...)).)))...))..)))). (-20.9)