mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCTCCATCCCAAAATAAGTGT ACTTATTTTGAGACGGAGGGA AACTACTACTCCCTCCATCCCAAAATAAGTGTCTCAACTTTGTACTAGCTCTAGTACAAAGTTGTACTAAGCTTGAGACACTTATTTTGAGACGGAGGGAAATGTACT TGAACATCAGCTTTTCTATAAACAATTTCACAAGCAGAACAAACATTGTCGCATGTAAAAAGAAACATATGGTATCAGGTTGTATTGCATATACCTAGGTGATCATAACTACTACTCCCTCCATCCCAAAATAAGTGTCTCAACTTTGTACTAGCTCTAGTACAAAGTTGTACTAAGCTTGAGACACTTATTTTGAGACGGAGGGAAATGTACTGAGTGCCAACTAAATTTAGACAACAACGGTATGAAAACTTACATTT 2 0 5' arm Hordeum_vulgare mirnest MIR1122 3e-35 tae-MIR1137 0.00000002 -46.6 ...(((...(((((((.((.(((((((((((((((((((((((((((....))))))))))).((.....)).)))))))))))))))).)).)))))))...))).. (-46.6)