mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTTGCCAATTCCTCCCATTC AGTGGGGGGCTTAGCAAGAAA GGAGGCAGAGGTAGTGGGGGGCTTAGCAAGAAAAATAAACAACTTCAATTCGCTATTTTTCTTGCCAATTCCTCCCATTCCAATGGTTT GGGGGATGGGTCTTATGGAGGCAGAGGTAGTGGGGGGCTTAGCAAGAAAAATAAACAACTTCAATTCGCTATTTTTCTTGCCAATTCCTCCCATTCCAATGGTTTCATGAGGTTACTCCTTTTCCTATCATATCCTTGTAACCCAACACCCCCATAACGTGTTCGACAGAGAGAGAGGGAAAGGGAGATAGATCTAGATGAAGTTGTTTGGATGGGTGATTTGGAAAGAAAAGTTTTTCTAGATACTGTGAAAGAAATTCTTTCCTATTCCACACATCCCATTGATTTCCTCTGGCTCCTCACCTTCCCTTTCTTTTCCTG 2 2 3' arm Panax_ginseng mirnest 100 100 -26.8 .....((..((.(((((((((.((.((((((((((((................)))))))))))).))..)))))))))))..)).... (-26.8)