mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TACTACCTCCGTCCCAAAATA TTTTGGGACGGGGGTAGTATA CATTAGGAAATACTACCTCCGTCCCAAAATATAAGACGTTGCAGTTCAAATTTGAACTGCAAAAACGTCTTATATTTTGGGACGGGGGTAGTATATTTCAAG ACCGATTTTNNNNTTTTTTTTTTCCTCTTCAAAACAAATTATATCCTCATTACAAAATTAGTGAAGCCTACAATACAATAACGTCGCGGTCTGTTTACATCGGCGGAAGCCCACGCCATTGCTCCCTGAGGACCCTGCTTTTCCTCGTACGCAACCCATCCATCCACTACCAAAAGAGGGCGCAGGGAGCATCAAACAAGTAAAACCAGGTACACTGCATTTCCTCACTCGGCCGATGGTTTTGCATCATCATCCATTTGATCATCTCCAGGAAGCCCAAATATCCTCAGGTTACGGTCCATAGAGCCGACGGCGATATATTTGGCATCAGTGCCGAACTTCGCAGAGGTCACTTTCCCTGTTCCCGACAAATCTGGTAAGGTCTTGATAAGATTCCATTCGGTCTTGACGTTAGCTACTTGATAAACCCTTATATCTGAACCAGCAACAGCAAGATAGGTACCGCTAAAATCAAATTCCACAGAATTTGTCGGCGTGTCCGAATCATATGGCGAGAAAGTCCTAAAATTTCTCAATTTCCTTAGATCCCAAAGCTTGACACCATCAAGAGCAGCAGTCGCCAGGAAGTAACCATTCTCAGAGAAGGACATAGCAGTGACAGGTCCAGCATGCCCCTCAAACTTTGCAACATTGGACTACAGACAAAAAAAATGTCCATTAGGAAATACTACCTCCGTCCCAAAATATAAGACGTTGCAGTTCAAATTTGAACTGCAAAAACGTCTTATATTTTGGGACGGGGGTAGTATATTTCAAGCACCAACATATGCATGACCATC 0 0 5' arm Pseudoroegneria_spicata mirnest MIR1122 0.00000000002 osa-MIR1439 0.0000003 -60.6 .....(((((((((((((((((((((((((((((((((((((((((((....)))))))))...)))))))))))))))))))))))))))))).))))... (-60.6)