mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGCAGTGTAGTTAGCTGATTGC CCAATCACTAACCACACAGCCAGG AGCCTGGTTACCAGGCAGTGTAGTTAGCTGATTGCCACCAGGACCAATCACTAACCACACAGCCAGGTAAAAAG 3 3 5' arm Gallus_gallus mirbase mir-34 2e-35 mmu-mir-34c 4e-21 -29.4 ...((..(((((.(((.((((.(((((.((((((((....))..))))))))))).)))).))).)))))..)) (-29.40)