mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCTCGGTCCCAAAATAAGTGA ACTTATTTTGGGACGGAGGGA GGCTTTTACTCCCTCGGTCCCAAAATAAGTGACACTTATTTTGGGACGGAGGGAGTACTTTA GGCACGAGAATTTGGTTTGTGTGTGGTAGCATTCCTCCTAGCTTCATAGTATGGTCTATCTAGCTTGGCTTTTACTCCCTCGGTCCCAAAATAAGTGACACTTATTTTGGGACGGAGGGAGTACTTTAATGAATCTGAAGAAGCGTTATGTTT 3 0 5' arm Triticum_monococcum mirnest MIR1122 0.00000005 osa-MIR1862c 0.000003 -34.2 ......(((((((((.((((((((((((((...)))))))))))))).)))))))))..... (-34.2)