mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCTCCGTCCCAAAATGTAAAA TTACATTTTGGGTCGGAGGAA ACTCCCTCCGTCCCAAAATGTAAAACTTTTTTGACACTATGATAGTATCAAAAAACGTCTTACATTTTGGGTCGGAGGAAA ACTCCCTCCGTCCCAAAATGTAAAACTTTTTTGACACTATGATAGTATCAAAAAACGTCTTACATTTTGGGTCGGAGGAAATACTAGTTTTAAATTGCGTGTTTACAGCCACAATGACAGGACAAGTTATCTTCAAAACATATATAATCAGATAACTAGAGACAAGTTACCAGGCACCAGCCGATGCATCCTCAAGCCTTTTCTCAAGTCGAGTGCACCTGTCTTGCCTAGAGTTCAGATCAGATTGCCACCATCGACGCCGTA 2 0 5' arm Triticum_turgidum_subsp._durum mirnest MIR1122 0.00000000007 tae-MIR1130 0.001 -37.2 ....((((((.((((((((((((.((((((((((.((((...)))).)))))))).)).)))))))))))).))))))... (-37.2)